MIBBI foundry modules

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Design notes: Within a section in the list below (i.e., between horizontal lines) a 'child' module (i.e., indented by one or more levels) will inherit the requirements of its parent (i.e., the first module above it that is less indented) for example, 'Aquatic environment' automatically picks up the properties of 'Environment'. Modules will also frequently pick up properties from non-parents (for example, 'Person' will be used frequently). In all cases, inclusion in a module of another module's content will be made explicit with a wiki link in monospace format (i.e., the indentation on the index page is redundant -- just a guide).

Within the modules linked below, bold text denotes a heading and italics denote a comment, neither of which require data.

The status of each module is denoted by its bullet: Stub (no content); Under construction; Draft available; Released.


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Investigation

Organism
Organismal genetic component

Environment
Geographic location

Sampling event
Sample description
Sample processing
Sample provenance

Study design

Analytical technique
Nucleic acid sequencing
Column chromatography
Capillary electrophoresis
Flow cytometry
Gel electrophoresis
Mass spectrometry
Nuclear magnetic resonance spectroscopy

Data set
Data processing
Nucleic acid sequencing data processing
Flow cytometry data processing
Gel electrophoresis data processing
Mass spectrometry data processing
Nuclear magnetic resonance spectroscopy data processing
Statistical analysis

Person or responsible role

Date

Time

Publication

Database record

Project-specific extensions

MIGS Investigation
MIGS Organism
Personal tools